Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852223.1_cds_XP_016511778.1_24483
CDS Infomation

[gene=LOC107828902] [db_xref=GeneID:107828902] [protein=FRIGIDA-like protein 3] [protein_id=XP_016511778.1] [location=join(73947..75000,75237..75403,77820..78443)] [gbkey=CDS]
Sequence

ATGGCTGAGATGGATCTTCTTTTGATAATCAAAAGTGTACCATCCCTGATTGAACAATTG
GGGAAGGCATTAAATGATCTTGAATCTCACGAAGATGCCTCCATGGATAAGGGTTTACTC
AAGGATATTGAAAGACACTTCCGGGATCTGGAGGCCTCAGCAGTGAACAAATCTTTGGAA
CTGGAAAGTAGAGAGAAAGCCTTTAAGGAACAAGAATCTGATGCACATCTGCTGATTACT
TCACGAGAGGCAGATATAGCTGCTAGGGAGCAAAATTTGTGGGATCAGTTGCAGGAACTT
AAAGATGCTGCAGTTTCTGCAATTGCTGCAGCACGGGGAGATCATCAATTGGCATCTTTA
GAGCATACAGATATAGAGGACAGCAAAGACATTGAGGTAAACAGCTCTCTTGGTGGAACA
AATGGACTTCATACTGGCTCAGAGGTAAAATCCTCTGGTAGAGCTGGTGAAAATGCTGAT
GGTGTTTCTGACAAGGTCAAACCTCGACCAGAACTGACACAATTATGTGAGAAGATGGAT
GCAGAAGGACTTCTGCATTATATCATGGAGAGTAAAAAGAGTATGACCTCAATTTCTGAG
GAACTCTCCGTTGCCCTTGAAGGTGCAAGTGAACCAGGCCGTTTGGTACTGGCTTCACTT
GAGTTCTTCTACTCTAATGATGAATCTAACTCTAAAGCTGAGGAAAGCAGAAATGCTAAC
CATAGCTTGCGTCAAGCCTGCGTTGTTTGTATGGAAGCCATAGCCACCTTGTTGGCGAAA
GCTAAACCAGGTGCTGATCACCTTCTGTACCCAGAAATTAAGCAGCAAGCCAAGGTCATT
GCTGATGAATGGAAGCCTAAGTTGGCTACTGCAGGCACTGATGCTGCCAATCAAGCTTCA
TTGGAAACCGGGGCATTTTTGCAGCTCCTTGCAACTTTTAGGATTGCTTCAGAGTTTGAT
GAAGAAGAGCTCTGCAAGTTTGTTCTTGCAGTGGCTCACAATAGGCAGGGGCCTGAGCTC
TGCCGTTCTCTTGGCTTAGCAGACAAAATGCCAGGTATCATTGAAGCATTGATTCATAAT
GAGAAGCAAATCGATGCTGCTCGTTTTATTCATACCTTCAAGCTGACTGAAAGATTCCCC
CTTGTCCCGCTCCTGAAAGGCTATTTGAGGGACTTGAGACGTAACGCACAAGGGAAGGGA
GGTAACTCGGGAAACAGAGAGGAACTTGCAGCTGTTAGGGCAGTGGTACGGTGTATTAGA
GATTACAAGCTTGAAGCAGAATATCCACTTGATCCACTACAAAGAAGGGTTGGTCAGCTG
GAAAAAGCCATTTCTAATGACAAATCCAAGTCTAATGATAAGAGAAGACATTCTGGATCA
GCTAAACATCAGCAATTCAAGAAACCACGGCCAAGTGGAGGAACACATGGATCTACCAGA
CCTGCTAACGTTCCTAGCAGACAGCCCCCCTCTGTTTTAATAGAGAGAGTGGCCGCTTAT
AATCCAAGCAGACAGGTCCCCTCTGGTTTAGTTGAGAGAGCAACTTATGCAGGATTGTCC
GATAAGTACACTCATCTTAGTACATCTTATGATTATCAAGCTCCAAGTCAGGCTGCATAT
CCCCAGCAATCCTATGAGCAGAGATCATATTACTATCCAGCTGATGACGGAACTACTGCA
ACTTCTTATGCACCTTCTCTGCCATATAGTTATGGAAATTACGCAGGCAGCGGAATGCCA
GTAGCAGATGAGAGAATTACTGCAAATTCTTATACAACAGATCTGTCATCTAGCTATGGC
AATTATGTGCCAACAGCACATCAATCCTACGTGCAGAAGGAGTAG

Peptide Sequence

PEP ID

XP_016511778.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 3 [Nicotiana tabacum]
Sequence

MAEMDLLLIIKSVPSLIEQLGKALNDLESHEDASMDKGLLKDIERHFRDLEASAVNKSLE
LESREKAFKEQESDAHLLITSREADIAAREQNLWDQLQELKDAAVSAIAAARGDHQLASL
EHTDIEDSKDIEVNSSLGGTNGLHTGSEVKSSGRAGENADGVSDKVKPRPELTQLCEKMD
AEGLLHYIMESKKSMTSISEELSVALEGASEPGRLVLASLEFFYSNDESNSKAEESRNAN
HSLRQACVVCMEAIATLLAKAKPGADHLLYPEIKQQAKVIADEWKPKLATAGTDAANQAS
LETGAFLQLLATFRIASEFDEEELCKFVLAVAHNRQGPELCRSLGLADKMPGIIEALIHN
EKQIDAARFIHTFKLTERFPLVPLLKGYLRDLRRNAQGKGGNSGNREELAAVRAVVRCIR
DYKLEAEYPLDPLQRRVGQLEKAISNDKSKSNDKRRHSGSAKHQQFKKPRPSGGTHGSTR
PANVPSRQPPSVLIERVAAYNPSRQVPSGLVERATYAGLSDKYTHLSTSYDYQAPSQAAY
PQQSYEQRSYYYPADDGTTATSYAPSLPYSYGNYAGSGMPVADERITANSYTTDLSSSYG
NYVPTAHQSYVQKE

Transcript Sequence

Gene sequence data has not been registered.